Suppose you decide (for example) that you want to put 100% of your bonds into a retirement account because they'll be more tax-efficient there. That doesn't stop you from relying on your taxable account at the beginning of your retirement. You'll just want to trade some of the bonds for stocks in that retirement account as you sell stocks in your taxable account to keep your overall asset allocation across all your accounts the way you would like it to be. Does that make things a bit less complicated?
Yes that is the jist of option #1 but it is more complicated. I can't put 100% bonds in Roth as it would be way too much and there are more than two asset classes(bonds/stocks). I guess I am hoping for some resource on how to really implement option #1 in a reasonable way, and some idea that it is worth the time?
I wasn't suggesting to fill your Roth completely with bonds, I was suggesting that you could put all the bonds you want to own in your Roth, along with another asset class or two. If you do this correctly, it can be a bit less work to maintain than trying to keep several asset classes in each account.
Suppose you want to own five asset classes: US stocks, international stocks, US bonds, international bonds, and REITs. If you own each of these asset classes in each account in the correct proportion, any time you add or subtract money from any account you might find yourself buying or selling five different funds. If a market correction spurs you to rebalance, you could be doing five trades per account. Alternatively you could split the asset classes across different accounts based on tax efficiency. Perhaps based on the relative account balances and your desired allocation you might decide to put all your US bonds and half your REITs in the Roth IRA; half your REITs, all the international bonds, and half your US stocks in the traditional IRA; all the international stocks and half the US stocks in the taxable account.
Now when you decide to add money to your taxable account, you'll take a look at your actual vs. ideal asset allocation. If you're a bit short on international or US stocks, you'll buy those and you're done. If you're a bit heavy on those, you'll buy US stocks in taxable, and trade some of your US stocks in your IRA for whatever you're short on. Either way you're not making five separate transactions like you might if you had each asset class in each account.