Edge vents are typically installed on houses where there is no overhang and they are for air intake so they do need to be as low as possible. So yes, you need to prevent them from clogging. However, my concern would be the area between the edge vent and your clogged soffit. With no airflow in that region, you could have serious problems with ice damming and leaks if there was a source of warm air in that area. Rather than install an edge vent, I would have cleaned out the soffit vents and installed baffles from there up to above the level of the insulation. Installing edge vents was a lazy and cheap move on the part of the roofers.