If you're counting your pension contribution as part of take-home, then you would not subtract it.
Maybe I should ask why you want to know your savings rate. That might shed a little light on how to treat the pension contribution.
Good question. I want to know my savings rate because I am trying to hit over 60% savings rate!!
If I was subtracting my pension from my gross pay along with taxes I could hit this savings rate. In my simplistic understanding it seems that a pension contribution is a savings just like contribution to a roth ira would be.
Edit:
I was reading this MMM article on savings rate (http://www.mrmoneymustache.com/2015/01/26/calculating-net-worth/) and if I follow that rule I don't even have to worry about what I do with pension contribution etc,. As that is something that I don't "take home" as its already deducted from my paycheck.
IF YOU ARE DOING THIS FOR FIRE:
I would probably subtract your pension from both gross and net pay and only count the cash that comes home.
Now, lets say you have a 60% savings rate with your $6,200 take home.
Break out... try to follow along
Take Home: $6,200
Spending: $2,480
Spend Yearly: $29,760
FIRE #: $744,000
Now, as a follow up, IF YOU ARE AIMING AT FIRE, I would figure out what the early cash-out of the pension would be at your FIRE date. AKA: 5 years from now, I could cash it out for $50,000.
I would then take that off my FIRE #
$744,000 - $50,000
TRUE FIRE #: $694,000NOTES
1. If you are not going to fire, and instead get a monthly payment from the pension, you would simply take that payment amount off of your monthly spending when calculating the fire number.
2. If you ARE going to fire but don't want to touch it, then never subtract it from your fire number. It will be a bonus, eventually.